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| NCIMB number | NCIMB 11943 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Escherichia coli |
| Depositor designation | U5/41 |
| Preservation method | Unknown |
| Price band | A |
| Media | 001 |
| Gas regime | aerobic |
| ACDP category | 2 |
| Hazard information | This species has been associated with diarrhoea, urinary tract infections. |
| Cellular Shape | Rod |
| Gram stain | Gram Negative |
| Depositor Company | National Collection of Type Cultures (NCTC) |
| Depositor Address | 61 Colindale Avenue London U.K. NW9 5HT |
| Source | Urine from cystitis patient |
| Isolated by | F. Kauffmann |
| Date of Accession | 27/01/1984 |
| History | F.Kauffman |
| Other collection IDs | ATCC11775 CCM5172 CECT515 CIP54.8 CN4382 DSM30083 NCDO1989 NCTC9001 |
| WDCM number | WDCM 00090 |
| Yeast? | False |
| K12 | No |
| References | Int. Bull. Bact. Nomen. Taxon. (1963) 13 p35 Skerman V.B.D., McGowran V. and Sneath P.H.A. (eds) (1980) Int J. syst. Bact. 30 pp225-420. Approved Lists of Bacterial Names. IJSEM (2003) 53:63 IJSEM (2003) 53:227 Microbiology of food and animal feeding stuffs--Guidelines on preparation and production of culture media-- Part 2: Practical guidelines on performance testing of culture media..Geneva (Switzerland): International Organization for Standardization/ANSI, (journal unknown) , ISO ISO 11133-2, 2003 Phylogenetic analysis of Salmonella, Shigella, and Escherichia coli strains on the basis of the gyrB gene sequence, J Clin Microbiol 40(8), 2779-2785, 2002 A novel real-time polymerase chain reaction-based method for the detection and quantification of lactose-fermenting Enterobacteriaceae in the dairy and other food industries, J Dairy Sci 93(3), 860-867, 2010 gyrA mutations associated with fluoroquinolone resistance in eight species of Enterobacteriaceae, Antimicrob Agents Chemother 42(10), 2661-2667, 1998 Microarray-based identification of bacteria in clinical samples by solid-phase PCR amplification of 23S ribosomal DNA sequences, J Clin Microbiol 42(3), 1048-1057, 2004 Recombining population structure of Plesiomonas shigelloides (Enterobacteriaceae) revealed by multilocus sequence typing, J Bacteriol 189(21), 7808-7818, 2007 Relationships of plant pathogenic enterobacteria based on partial atpD, carA, and recA as individual and concatenated nucleotide and peptide sequences, Syst Appl Microbiol 30(5), 343-354, 2007 Description of new Ensifer strains from nodules and proposal to transfer Ensifer adhaerens Casida 1982 to Sinorhizobium as Sinorhizobium adhaerens comb. nov. Request for an Opinion, Int J Syst Evol Microbiol 53(4), 1207-1217, 2003 Escherichia albertii sp. nov., a diarrhoeagenic species isolated from stool specimens of Bangladeshi children, Int J Syst Evol Microbiol 53(3), 807-810, 2003 Application of flow cytometry and fluorescent in situ hybridization for assessment of exposures to airborne bacteria, Appl Environ Microbiol 63(4), 1557-1563, 1997 Enterococci in Water by Membrane Filtration Using membrane-Enterococcus-Esculin Iron Agar.Washington, DC: Environmental Protection Agency, (journal unknown) , EPA EPA Method 1106.1, 2005 Enterococci in Water by Membrane Filtration Using membrane-Enterococcus Indoxyl-B-D-Glucoside Agar.Washington, DC: Environmental Protection Agency, (journal unknown) , EPA EPA Method 1600, 2005 Erwinia isolates from the bacterial shoot blight of pear in Japan are closely related to Erwinia pyrifoliae based on phylogenetic analyses of gyrB and rpoD genes, J Gen Plant Pathol 73, 53-58, 2007 Escherichia coli in Water by Membrane Filtration using membrane-Thermotolerant Escherichia coli Agar (mTEC).Washington, DC: Environmental Protection Agency, (journal unknown) , EPA EPA Method 1103.1, 2005 Escherichia coli in Water by Membrane Filtration Using Modified membrane-Thermotolerant Escherichia coli Agar.Washington, DC: Environmental Protection Agency, (journal unknown) , EPA EPA Method 1603, 2005 Fecal Coliforms in Sewage Sludge (Biosolids) by Multiple-Tube Fermenation using Lauryl Tryptose Broth (LTB) and EC Medium.Washington, DC: Environmental Protection Agency, (journal unknown) , EPA EPA Method 1680, 2005 Food Microbiology. Methods2.12: Examination for specific organisms--Escherichia coli in bivalve molluscs--Rapid method.Sydney, NSW, Australia: Standards Australia, (journal unknown) , Standards Australia AS/NZS 1766.2.12, 2002 In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes, Appl Environ Microbiol 67(2), 961-968, 2001 Sequence heterogeneities among 16S ribosomal RNA sequences, and their effect on phylogenetic analyses at the species level, Mol Biol Evol 13(3), 451-461, 1996 Simultaneous detection and differentiation of Escherichia coli populations from environmental freshwaters by means of sequence variations in a fragment of the beta-D-glucuronidase gene, Appl Environ Microbiol 66(4), 1340-1346, 2000 Species-wide variation in the Escherichia coli flagellin (H-antigen) gene, J Bacteriol 185(9), 2936-2943, 2003 Statistical superiority of genome-probing microarrays as genomic DNA-DNA hybridization in revealing the bacterial phylogenetic relationship compared to conventional methods, J Microbiol Methods 75(3), 523-530, 2008 Use of the tna operon as a new molecular target for Escherichia coli detection, Appl Environ Microbiol 73(19), 6321-6325, 2007 Water microbiology. Method 16: Bactericidal efficiency of water disinfecting tablets.Sydney, NSW, Australia: Standards Australia, (journal unknown) , Standards Australia AS/NZS 4276.16, 1999 Water microbiology. Method 19: Examination for thermophilic Campylobacter spp. --Membrane filtration.Sydney, NSW, Australia: Standards Australia, (journal unknown) , Standards Australia AS/NZS 4276.19, 2001 |