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| NCIMB number | NCIMB 2176 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Roseobacter denitrificans |
| Depositor designation | OCh114 |
| Preservation method | Lyophilised |
| Preserved as | Erythrobacter longus |
| Other catalogue information | Contains bacteriochlorophyll a. Cluster C of Shiba |
| Price band | A |
| Media | 211230 |
| Gas regime | aerobic |
| Incubation period | 3 days |
| Growth factors (and/or information) | special medium, 20C, 3d: fair growth |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth/Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Orange/Red |
| Colony Opacity | Semi Transparent |
| Cellular Shape | Slender Rod |
| Cellular Size | short to medium |
| Cellular Arrangement | Singly |
| Cellular Motility | Yes |
| Gram stain | Gram Negative |
| Cellular (Other) | Parallel Sides, Rounded Ends |
| Depositor Name | T.Shiba |
| Depositor Company | Otsuchi Marine Research Center |
| Depositor Address | Ocean Research Institute, University of Tokyo, Akahama, Otsuchi, Iwate, 028-11 Japan |
| Source | "Seaweed, Enteromorpha linza (L.), Aburatsub Inlet, Kanagawa, Japan" |
| Isolated by | T.Shiba |
| Date of Isolation | 02/01/1978 |
| Date of Accession | 23/09/1982 |
| Other collection IDs | ATCC33942 |
| Yeast? | False |
| K12 | No |
| References | Shiba T., Simidu U. and Taga N. (1979) Appl. environ. Microbiol. 39 pp43-45 Shiba T. and Simidu U. (1982) Int. J. syst. Bact. 32 pp211-217 Shiba T. (1991) Syst. appl. Microbiol. 14 pp140-145 (Unknown), The prokaryotes 102, 2156, 1992 Comparative study of the gating motif and C-type inactivation in prokaryotic voltage-gated sodium channels, J Biol Chem 285(6), 3685-3694, 2010 Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples, Appl Environ Microbiol 64(10), 3769-3775, 1998 Differentiation of newly described antarctic bacterial isolates related to Roseobacter species based on 16S-23S rDNA internal transcribed spacer sequences, Int J Syst Evol Microbiol 50 Pt 2, 909-915, 2000 Light-induced changes of carotenoid pigments in anaerobic cells of the aerobic photosynthetic bacterium Roseobacter denitrificans Erythrobacter sp OCh 114 reduction of spheroidenone to 3,4 dihydrospheroidenone, Arch Microbiol 155, 473-476, 1991 Lipopolysaccharide and porin of Roseobacter denitrificans, confirming its phylogenetic relationship to the alpha-3 subgroup of Proteobacteria, Microbiology 141 ( Pt 8), 2013-2017, 1995 Phylogenetic relationships of the helical-shaped bacteria in the alpha Proteobacteria inferred from 16S rDNA sequences, J Gen Appl Microbiol 43(2), 89-95, 1997 Porphyrobacter neustonensis gen. nov., sp. nov., an aerobic bacteriochlorophyll-synthesizing budding bacterium from fresh water, Int J Syst Bacteriol 43(1), 125-134, 1993 Roseobacter litoralis gen. nov., sp. nov., and Roseobacter denitrificans sp. nov., aerobic pink-pigmented bacteria which contain bacteriochlorophylla, Syst Appl Microbiol 14, 140-145, 1991 Roseovarius tolerans gen. nov., sp. nov., a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake, Int J Syst Bacteriol 49 Pt 1, 137-147, 1999 Structure of the puf operon of the obligately aerobic, bacteriochlorophyll alpha-containing bacterium Roseobacter denitrificans OCh114 and its expression in a Rhodobacter capsulatus puf puc deletion mutant, J Bacteriol 179(17), 5247-5258, 1997 The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism., J Bacteriol 189(3), 683-690, 2007 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 37, Int J Syst Bacteriol 41, 331, 1991 |