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| NCIMB number | NCIMB 13930 |
| Deposit type | Bacteria |
| Type strain | Yes |
| GMO | No |
| Taxon name | Shewanella violacea |
| Depositor designation | DSS12 |
| Preservation method | Lyophilised |
| Price band | A |
| Media | 211 |
| Gas regime | aerobic |
| Growth factors (and/or information) | Growth after 10 days. Obligate psychrophile therefore media has to be chilled prior to use. |
| ACDP category | 1 |
| Colony Edge | Entire |
| Colony Surface | Smooth & Shiny |
| Colony Shape | Circular |
| Colony Elevation | Convex |
| Colony Colour | Off White |
| Colony Opacity | Transparent |
| Cellular Shape | Filamentous |
| Cellular Arrangement | Groups |
| Gram stain | Gram Negative |
| Depositor Company | Japanese Collection of Microorganisms (JCM) |
| Depositor Address | Hirosawa, Wako-shi Saitama 351-01 Japan |
| Source | "Deep-sea sediment, 5110m depth, Ryukyu trench" |
| Isolated by | Chiaki Kato |
| Date of Accession | 18/10/2002 |
| History | Y.Nogi DSS12 |
| Other collection IDs | "CIP 106290, JCM 10179" |
| Yeast? | False |
| K12 | No |
| References | Cell-free protein synthesis using cell extract of Pseudomonas fluorescens and CspA promoter, Biochem Biophys Res Commun 319(2), 671-676, 2004 Cloning and characterization of dihydrofolate reductases from deep-sea bacteria, J Biochem 147(4), 591-599, 2010 Cloning and overproduction of the rpoZ gene encoding an RNA polymerase omega subunit from a deep-sea piezophilic Shewanella violacea strain DSS12, DNA Seq 15(2), 118-122, 2004 Cloning of two cold shock genes, cspA and cspG, from the deep-sea psychrophilic bacterium Shewanella violacea strain DSS12, FEMS Microbiol Lett 178(1), 123-128, 1999 Comparison of the gene expression of aspartate beta-D-semialdehyde dehydrogenase at elevated hydrostatic pressure in deep-sea bacteria, J Biochem (Tokyo) 121(4), 717-723, 1997 Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples, Biodivers Conserv 4, 1-9, 1995 Isolation of the rpoD gene encoding the principal sigma factor of the deep-sea piezophilic bacterium Shewanella violacea strain DSS12 and its overexpression in Escherichia coli, Biosci Biotechnol Biochem 65(1), 190-193, 2001 Mechanisms of gene expression controlled by pressure in deep-sea microorganisms, Extremophiles 2(3), 149-154, 1998 Open reading frame 3 of the barotolerant bacterium strain DSS12 is complementary with cydD in Escherichia coli: cydD functions are required for cell stability at high pressure, J Biochem (Tokyo) 120(2), 301-305, 1996 Pressure-regulated biosynthesis of cytochrome bd in piezo- and psychrophilic deep-sea bacterium Shewanella violacea DSS12, Extremophiles 9(3), 247-253, 2005 Pressure regulation of soluble cytochromes c in a deep-Sea piezophilic bacterium, Shewanella violacea, J Bacteriol 182(10), 2945-2952, 2000 Structure of genes in a pressure-regulated operon and adjacent. regions from a barotolerant bacterium strain DSS12, J Mar Biotechnol 5, 210-218, 1997 Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov, Arch Microbiol 170(5), 331-338, 1998 The narQP genes for a two-component regulatory system from the deep-sea bacterium Shewanella violacea DSS12, DNA Seq 19(3), 308-312, 2008 Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 69, Int J Syst Bacteriol 49, 341-342, 1999 |